PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00335.1.p
Common NameMIMGU_mgv1a013791mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 211aa    MW: 23417.3 Da    PI: 6.6657
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00335.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.22e-2971129259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK+ ++++ pr+YY+C  + +Cpvkkkv+rsa+dp++++ +Yeg+Hnh+
  Migut.A00335.1.p  71 KDGYQWRKYGQKVTRDNPSPRAYYKCYLSpNCPVKKKVQRSANDPSLLVAVYEGQHNHH 129
                       8*************************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-2863129IPR003657WRKY domain
PROSITE profilePS5081125.9765131IPR003657WRKY domain
SuperFamilySSF1182902.09E-2567130IPR003657WRKY domain
SMARTSM007741.4E-3070130IPR003657WRKY domain
PfamPF031062.7E-2471129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MQTDDLMEEL SRMKWENEKL NDMLQIKRKL ADEFQIDNFS NHGYCMPKEI KSNVSRVHVR  60
INPSDTNLVI KDGYQWRKYG QKVTRDNPSP RAYYKCYLSP NCPVKKKVQR SANDPSLLVA  120
VYEGQHNHHP TGGEISVAAA AGGGGSSSPG TTPASLDLTD PIICSRMQNA IAEKMVSSLT  180
RNDSFTAALA EAIAGRILND ESEDNYNDCF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A4e-21691281674Probable WRKY transcription factor 4
1wj2_A4e-21691281674Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.12e-83PREDICTED: probable WRKY transcription factor 40
SwissprotQ9C5T49e-52WRK18_ARATH; WRKY transcription factor 18
TrEMBLA0A022Q0981e-159A0A022Q098_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000190584e-53(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.23e-49WRKY DNA-binding protein 18